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ysnF [2019-01-04 15:23:46]
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ysnF [2019-01-04 15:23:46]

general stress protein, survival of ethanol stress
locus
BSU28340
pI
4.23
mw
32.12 kDa
protein length
286 aa Sequence Blast
gene length
858 bp Sequence Blast
function
survival of ethanol stress
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.1|General stress proteins (controlled by SigB)]
  • [category|SW 6|Groups of genes] → [category|SW 6.4|Phosphoproteins] → [category|SW 6.4.8|Phosphorylation on either a Ser, Thr or Tyr residue]

    • Gene

    Coordinates
    2,898,931 → 2,899,752

    The protein

    Modification

  • phosphorylated on ser/ thr/ tyr [Pubmed|16493705]

    • Structure

  • ''''Italic text

    • Expression and Regulation

    Operons

    genes
    [gene|21322F3BAB6C60568C7AB6B89ED800EC023DBD49|ysnF]
    description
    [Pubmed|8969504]

    sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|15805528], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]

    • regulation

  • induced by stress ([protein|search|SigB]) [Pubmed|15805528]
    • view in new tab

    Biological materials

    Mutant

  • MGNA-B029 (ysnF::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1028 NBRP B. subtilis, Japan]
  • BKE28340 (Δ[gene|21322F3BAB6C60568C7AB6B89ED800EC023DBD49|ysnF]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE28340 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATCAATCTCCTCCTTTA, downstream forward: _UP4_TGAAAATCATAGACCGACAA
  • BKK28340 (Δ[gene|21322F3BAB6C60568C7AB6B89ED800EC023DBD49|ysnF]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK28340 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATCAATCTCCTCCTTTA, downstream forward: _UP4_TGAAAATCATAGACCGACAA

    • References

  • 16493705,15805528,8969504